Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 ENPP7P14-201ENST00000621765 1040 ntBASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 PRSS30P-206ENST00000641773 873 ntBASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.22■□□□□ 0.19
HCFC2Q9Y5Z7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 PCDHA14-201ENST00000506751 2298 ntBASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 AC026471.1-201ENST00000564629 3026 ntBASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 CHMP4BP1-201ENST00000556017 588 ntBASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 AC244157.2-201ENST00000616239 1006 ntBASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HCFC2Q9Y5Z7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HCFC2Q9Y5Z7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 COX5BP1-201ENST00000507622 393 ntBASIC16.2■□□□□ 0.18
HCFC2Q9Y5Z7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms