Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL4A3BPQ9Y5P4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 SSR4P1-203ENST00000599569 2260 ntBASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 MEP1AP4-201ENST00000423244 1087 ntBASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 RN7SL692P-201ENST00000464677 288 ntBASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 CHCHD2P3-201ENST00000603038 451 ntBASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 PPT1-215ENST00000641471 2368 ntBASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL4A3BPQ9Y5P4 AC013268.4-201ENST00000637413 2228 ntBASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 AC074338.1-201ENST00000416825 156 ntBASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 AC005034.1-201ENST00000426657 489 ntBASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 RPL13P2-201ENST00000440687 659 ntBASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 MEIS3P1-201ENST00000495167 958 ntBASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 AL596325.1-201ENST00000563991 1082 ntBASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 AC136621.1-201ENST00000624017 2304 ntBASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A3BPQ9Y5P4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AC092127.1-201ENST00000567093 3455 ntBASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms