Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 AC141586.5-201ENST00000624546 2050 ntBASIC17.55■□□□□ 0.4
TRIM17Q9Y577 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM17Q9Y577 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 AC103988.2-201ENST00000561804 725 ntBASIC17.54■□□□□ 0.4
TRIM17Q9Y577 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM17Q9Y577 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 AC104073.2-201ENST00000453737 312 ntBASIC17.53■□□□□ 0.4
TRIM17Q9Y577 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 BNIP3P13-201ENST00000599968 566 ntBASIC17.53■□□□□ 0.4
TRIM17Q9Y577 AC092171.5-201ENST00000608012 942 ntBASIC17.53■□□□□ 0.4
TRIM17Q9Y577 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 AC060834.1-201ENST00000443027 2032 ntBASIC17.53■□□□□ 0.4
TRIM17Q9Y577 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM17Q9Y577 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM17Q9Y577 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.52■□□□□ 0.4
TRIM17Q9Y577 AC078991.1-201ENST00000437297 610 ntBASIC17.52■□□□□ 0.4
TRIM17Q9Y577 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms