Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
R3HCC1Q9Y3T6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 AC006277.1-201ENST00000624348 1610 ntBASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 YBX2P1-201ENST00000394192 760 ntBASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 MCCD1P2-201ENST00000423228 335 ntBASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 CYP2A7P1-201ENST00000595391 815 ntBASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 AC097376.2-205ENST00000610159 5334 ntBASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
R3HCC1Q9Y3T6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 AC002056.1-201ENST00000395613 760 ntBASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 HMGA1P7-201ENST00000406908 502 ntBASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 SLC22A20-204ENST00000530038 1673 ntBASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3HCC1Q9Y3T6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
R3HCC1Q9Y3T6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 OR2I1P-209ENST00000641730 5365 ntBASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 AC013467.2-201ENST00000605472 835 ntBASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms