Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 AC112504.1-201ENST00000623415 1841 ntBASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 AC018892.3-201ENST00000623986 2499 ntBASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPH3AQ9Y2J0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 REXO1L1P-202ENST00000608646 1974 ntBASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 AZGP1P1-201ENST00000411909 902 ntBASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 AC044860.1-202ENST00000559481 777 ntBASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 AC010336.2-201ENST00000564226 506 ntBASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 AL358472.5-202ENST00000641448 1267 ntBASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPH3AQ9Y2J0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 LINC02228-204ENST00000642115 2962 ntBASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 MRPS18AP1-201ENST00000414458 589 ntBASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.47□□□□□ -0.09
RPH3AQ9Y2J0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms