Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHA4Q9UN74 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 DFFBP1-201ENST00000433250 979 ntBASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 AC055876.2-201ENST00000531834 546 ntBASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 RRP7BP-205ENST00000566851 833 ntBASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 AC036164.1-201ENST00000570544 333 ntBASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 AC099568.2-201ENST00000609194 695 ntBASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHA4Q9UN74 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 RN7SL399P-201ENST00000471648 279 ntBASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AL132655.2-201ENST00000596276 594 ntBASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AC092364.2-202ENST00000597012 1073 ntBASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AC025181.2-201ENST00000606994 802 ntBASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AC007541.1-201ENST00000570282 1469 ntBASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AC126177.1-201ENST00000547829 2218 ntBASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHA4Q9UN74 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 FAM86LP-201ENST00000478302 853 ntBASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms