Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB4Q9UN71 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AC002056.1-201ENST00000395613 760 ntBASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AC002347.1-201ENST00000569543 541 ntBASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AC068137.2-201ENST00000605408 478 ntBASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 GRK6P1-201ENST00000400595 1711 ntBASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 AC011477.6-201ENST00000604980 1927 ntBASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB4Q9UN71 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 AC009078.2-202ENST00000463353 338 ntBASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 AC074386.1-202ENST00000463561 864 ntBASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 RPL13AP23-201ENST00000480739 586 ntBASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 AC112191.1-201ENST00000523689 701 ntBASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 AP001282.1-201ENST00000531301 1499 ntBASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 AC232323.1-201ENST00000540724 2099 ntBASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 REXO1L5P-201ENST00000622260 2098 ntBASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB4Q9UN71 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms