Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SYNPO2Q9UMS6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AL139384.1-201ENST00000612143 3047 ntBASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AC092658.1-201ENST00000505836 891 ntBASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AC078819.1-201ENST00000547454 765 ntBASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AC012085.1-201ENST00000548270 765 ntBASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AC138951.2-201ENST00000623455 1161 ntBASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 AC092127.1-201ENST00000567093 3455 ntBASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SYNPO2Q9UMS6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 AHCYP2-201ENST00000430630 1300 ntBASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 ACTBP11-201ENST00000436287 1126 ntBASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 AC022616.1-201ENST00000518688 554 ntBASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SYNPO2Q9UMS6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
SYNPO2Q9UMS6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms