Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 AL591846.1-201ENST00000451736 433 ntBASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 AC104306.2-201ENST00000451877 341 ntBASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 AP001258.2-201ENST00000529891 490 ntBASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 AC068587.10-201ENST00000641210 219 ntBASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GTF2IRD1Q9UHL9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 NUS1P3-201ENST00000423502 862 ntBASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 HOMER2P2-201ENST00000451621 847 ntBASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 RN7SL48P-201ENST00000579283 293 ntBASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 AC005695.3-201ENST00000614522 232 ntBASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 AL008638.5-201ENST00000623814 1298 ntBASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 AC148477.4-201ENST00000613430 1793 ntBASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GTF2IRD1Q9UHL9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.08■□□□□ 0.33
GTF2IRD1Q9UHL9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GTF2IRD1Q9UHL9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.08■□□□□ 0.33
GTF2IRD1Q9UHL9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
GTF2IRD1Q9UHL9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.08■□□□□ 0.33
GTF2IRD1Q9UHL9 AL513523.2-202ENST00000427283 2040 ntBASIC17.08■□□□□ 0.33
GTF2IRD1Q9UHL9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GTF2IRD1Q9UHL9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2IRD1Q9UHL9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GTF2IRD1Q9UHL9 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms