Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 PRAL-201ENST00000624952 3286 ntBASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPARGC1AQ9UBK2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 HNRNPUP1-201ENST00000554987 333 ntBASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 AP005117.1-202ENST00000581724 1908 ntBASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 Z97205.2-201ENST00000564697 1639 ntBASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPARGC1AQ9UBK2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
PPARGC1AQ9UBK2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PPARGC1AQ9UBK2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 LINC02228-204ENST00000642115 2962 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 AL512638.1-201ENST00000457493 794 ntBASIC16.39■□□□□ 0.21
PPARGC1AQ9UBK2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms