Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 LINC00528-201ENST00000600723 2160 ntBASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 TFAMP1-201ENST00000412727 736 ntBASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AC142381.1-201ENST00000426099 345 ntBASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 EEF1DP4-201ENST00000446006 880 ntBASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 FAM86C2P-203ENST00000528684 1004 ntBASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AC026979.3-201ENST00000607315 403 ntBASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE2Q9NRR3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AL450487.1-201ENST00000426799 995 ntBASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AL671277.1-201ENST00000429656 993 ntBASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AC007967.2-201ENST00000432613 625 ntBASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AL135744.1-201ENST00000565098 629 ntBASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 SLC25A6P4-201ENST00000586535 553 ntBASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms