Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SP110Q9HB58 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
SP110Q9HB58 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SP110Q9HB58 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 AC015922.1-201ENST00000421102 1152 ntBASIC16.09■□□□□ 0.17
SP110Q9HB58 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.09■□□□□ 0.17
SP110Q9HB58 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.09■□□□□ 0.17
SP110Q9HB58 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.09■□□□□ 0.17
SP110Q9HB58 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.09■□□□□ 0.17
SP110Q9HB58 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.09■□□□□ 0.17
SP110Q9HB58 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.09■□□□□ 0.17
SP110Q9HB58 AC004840.1-201ENST00000636359 365 ntBASIC16.09■□□□□ 0.17
SP110Q9HB58 AC127383.1-201ENST00000444697 1800 ntBASIC16.09■□□□□ 0.17
SP110Q9HB58 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 TSPY26P-202ENST00000565928 3884 ntBASIC16.09■□□□□ 0.17
SP110Q9HB58 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SP110Q9HB58 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SP110Q9HB58 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.08■□□□□ 0.17
SP110Q9HB58 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.08■□□□□ 0.17
SP110Q9HB58 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SP110Q9HB58 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SP110Q9HB58 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SP110Q9HB58 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SP110Q9HB58 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SP110Q9HB58 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.08■□□□□ 0.17
SP110Q9HB58 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.08■□□□□ 0.17
SP110Q9HB58 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SP110Q9HB58 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SP110Q9HB58 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SP110Q9HB58 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.08■□□□□ 0.16
SP110Q9HB58 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
SP110Q9HB58 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SP110Q9HB58 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 KRT18P64-201ENST00000434946 1219 ntBASIC16.08■□□□□ 0.16
SP110Q9HB58 RPL13P2-201ENST00000440687 659 ntBASIC16.08■□□□□ 0.16
SP110Q9HB58 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.08■□□□□ 0.16
SP110Q9HB58 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.08■□□□□ 0.16
SP110Q9HB58 AC104794.3-201ENST00000566840 1248 ntBASIC16.08■□□□□ 0.16
SP110Q9HB58 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.08■□□□□ 0.16
SP110Q9HB58 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.08■□□□□ 0.16
SP110Q9HB58 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.08■□□□□ 0.16
SP110Q9HB58 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SP110Q9HB58 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SP110Q9HB58 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.08■□□□□ 0.16
SP110Q9HB58 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.08■□□□□ 0.16
SP110Q9HB58 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.08■□□□□ 0.16
SP110Q9HB58 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SP110Q9HB58 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SP110Q9HB58 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SP110Q9HB58 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.08■□□□□ 0.16
SP110Q9HB58 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SP110Q9HB58 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP110Q9HB58 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP110Q9HB58 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.07■□□□□ 0.16
SP110Q9HB58 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.07■□□□□ 0.16
SP110Q9HB58 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SP110Q9HB58 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP110Q9HB58 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SP110Q9HB58 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SP110Q9HB58 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SP110Q9HB58 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP110Q9HB58 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SP110Q9HB58 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP110Q9HB58 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SP110Q9HB58 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SP110Q9HB58 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms