Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 IGHV3-62-201ENST00000520057 340 ntBASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 AC243562.1-201ENST00000560672 389 ntBASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 AC040169.1-201ENST00000565382 521 ntBASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 CYP4F24P-201ENST00000586049 1580 ntBASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 SBF1P1-201ENST00000444527 5631 ntBASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.58□□□□□ -0.08
POLR2J3Q9H1A7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 AC018892.3-201ENST00000623986 2499 ntBASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 MCCD1P2-201ENST00000423228 335 ntBASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 SPCS2P4-201ENST00000436160 681 ntBASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 LINC01225-203ENST00000563550 1244 ntBASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
POLR2J3Q9H1A7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 AC126365.1-201ENST00000578585 1514 ntBASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 AL136982.4-201ENST00000437689 1740 ntBASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J3Q9H1A7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms