Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 AC009090.5-201ENST00000624886 2285 ntBASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 AL390755.1-201ENST00000623716 2027 ntBASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 AC067863.1-201ENST00000494933 530 ntBASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 MIR4745-201ENST00000577608 62 ntBASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXP3Q9BZS1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 AC148477.4-201ENST00000613430 1793 ntBASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 CNN2P2-201ENST00000443536 909 ntBASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 CNN2P3-201ENST00000450201 906 ntBASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 AC069262.1-201ENST00000539058 672 ntBASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 AL136317.3-201ENST00000618497 906 ntBASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms