Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 AL607033.1-201ENST00000623900 1599 ntBASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABARAPL3Q9BY60 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 AC113367.3-201ENST00000508316 1912 ntBASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.27□□□□□ -0.12
GABARAPL3Q9BY60 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AC098831.1-202ENST00000438821 336 ntBASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 KRT18P35-201ENST00000510488 1269 ntBASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AC148477.8-201ENST00000624298 468 ntBASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GABARAPL3Q9BY60 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABARAPL3Q9BY60 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms