Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLF1Q9BQI6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.24■□□□□ 0.51
SLF1Q9BQI6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLF1Q9BQI6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLF1Q9BQI6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SLF1Q9BQI6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLF1Q9BQI6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SLF1Q9BQI6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLF1Q9BQI6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.23■□□□□ 0.51
SLF1Q9BQI6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 TSPY26P-202ENST00000565928 3884 ntBASIC18.23■□□□□ 0.51
SLF1Q9BQI6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 AC124283.3-201ENST00000570869 594 ntBASIC18.23■□□□□ 0.51
SLF1Q9BQI6 MIR5189-201ENST00000577370 114 ntBASIC18.23■□□□□ 0.51
SLF1Q9BQI6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 AL049840.4-201ENST00000602422 811 ntBASIC18.23■□□□□ 0.51
SLF1Q9BQI6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 AC011477.6-201ENST00000604980 1927 ntBASIC18.23■□□□□ 0.51
SLF1Q9BQI6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLF1Q9BQI6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 CROCCP4-201ENST00000457096 498 ntBASIC18.22■□□□□ 0.51
SLF1Q9BQI6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 AC233724.13-201ENST00000598383 410 ntBASIC18.22■□□□□ 0.51
SLF1Q9BQI6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLF1Q9BQI6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLF1Q9BQI6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.21■□□□□ 0.51
SLF1Q9BQI6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
SLF1Q9BQI6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.21■□□□□ 0.51
SLF1Q9BQI6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLF1Q9BQI6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLF1Q9BQI6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.21■□□□□ 0.51
SLF1Q9BQI6 AC018665.1-201ENST00000622927 1362 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms