Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTP4Q96DX8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTP4Q96DX8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
RTP4Q96DX8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTP4Q96DX8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 TUBB3P1-201ENST00000405796 1332 ntBASIC15.97■□□□□ 0.15
RTP4Q96DX8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 AL133267.1-201ENST00000398220 340 ntBASIC15.97■□□□□ 0.15
RTP4Q96DX8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 KRT18P64-201ENST00000434946 1219 ntBASIC15.97■□□□□ 0.15
RTP4Q96DX8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 MIR4745-201ENST00000577608 62 ntBASIC15.97■□□□□ 0.15
RTP4Q96DX8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 AL645728.2-202ENST00000641679 227 ntBASIC15.97■□□□□ 0.15
RTP4Q96DX8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 CICP23-201ENST00000605013 2741 ntBASIC15.97■□□□□ 0.15
RTP4Q96DX8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTP4Q96DX8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RTP4Q96DX8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 AC055876.3-201ENST00000431496 288 ntBASIC15.96■□□□□ 0.15
RTP4Q96DX8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 KLF2P3-201ENST00000451977 1087 ntBASIC15.96■□□□□ 0.15
RTP4Q96DX8 COX20P2-201ENST00000452636 358 ntBASIC15.96■□□□□ 0.15
RTP4Q96DX8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 AC138649.4-201ENST00000612222 287 ntBASIC15.96■□□□□ 0.15
RTP4Q96DX8 AJ011932.1-201ENST00000621707 465 ntBASIC15.96■□□□□ 0.15
RTP4Q96DX8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 CICP11-201ENST00000434745 2827 ntBASIC15.96■□□□□ 0.15
RTP4Q96DX8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RTP4Q96DX8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTP4Q96DX8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms