Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL365330.1-201ENST00000607459 531 ntBASIC14.88□□□□□ -0.03
TM9SF4Q92544 AC017083.2-201ENST00000608069 979 ntBASIC14.88□□□□□ -0.03
TM9SF4Q92544 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 TNRC18P2-201ENST00000417666 2714 ntBASIC14.88□□□□□ -0.03
TM9SF4Q92544 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF4Q92544 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.88□□□□□ -0.03
TM9SF4Q92544 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 AC112504.1-201ENST00000623415 1841 ntBASIC14.87□□□□□ -0.03
TM9SF4Q92544 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 TIMM17BP1-201ENST00000545713 516 ntBASIC14.87□□□□□ -0.03
TM9SF4Q92544 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 SRD5A3P1-201ENST00000603021 949 ntBASIC14.87□□□□□ -0.03
TM9SF4Q92544 AC099568.2-201ENST00000609194 695 ntBASIC14.87□□□□□ -0.03
TM9SF4Q92544 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF4Q92544 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF4Q92544 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 CDC14C-201ENST00000428251 1719 ntBASIC14.86□□□□□ -0.03
TM9SF4Q92544 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AL031731.1-201ENST00000642131 2094 ntBASIC14.86□□□□□ -0.03
TM9SF4Q92544 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 PRAL-201ENST00000624952 3286 ntBASIC14.86□□□□□ -0.03
TM9SF4Q92544 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF4Q92544 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.86□□□□□ -0.03
TM9SF4Q92544 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms