Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 RPL5P21-201ENST00000404620 815 ntBASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AC087499.1-201ENST00000418141 1075 ntBASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 TOB2P1-201ENST00000469761 992 ntBASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AC243562.2-201ENST00000561247 970 ntBASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AC092329.2-201ENST00000598402 547 ntBASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AC006011.2-201ENST00000621313 1158 ntBASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 AC015802.1-201ENST00000588104 1449 ntBASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MBD3L1Q8WWY6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AC106795.1-205ENST00000512851 1056 ntBASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AC002347.1-201ENST00000569543 541 ntBASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AC011474.4-201ENST00000623523 2076 ntBASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MBD3L1Q8WWY6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms