Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 AL035456.1-201ENST00000456064 1369 ntBASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 AZGP1P1-201ENST00000411909 902 ntBASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 CNN2P11-201ENST00000429351 262 ntBASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 AC007967.4-201ENST00000614700 386 ntBASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 AC127383.1-201ENST00000444697 1800 ntBASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
TRAF3IP1Q8TDR0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 BANF1P1-201ENST00000553684 263 ntBASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 HNRNPUP1-201ENST00000554987 333 ntBASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 RN7SL828P-201ENST00000607615 303 ntBASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms