Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CFAP61Q8NHU2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 AC004461.1-201ENST00000412461 403 ntBASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 AC004967.1-201ENST00000453589 447 ntBASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 SNHG9-202ENST00000564014 471 ntBASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 LINC00528-201ENST00000600723 2160 ntBASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CFAP61Q8NHU2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 AC069224.1-201ENST00000566372 1715 ntBASIC16■□□□□ 0.15
CFAP61Q8NHU2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 ST20-AS1-201ENST00000560255 4223 ntBASIC16■□□□□ 0.15
CFAP61Q8NHU2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 AC069335.1-201ENST00000489972 472 ntBASIC16■□□□□ 0.15
CFAP61Q8NHU2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 AC105233.2-201ENST00000523697 349 ntBASIC16■□□□□ 0.15
CFAP61Q8NHU2 AF228730.5-201ENST00000530288 346 ntBASIC16■□□□□ 0.15
CFAP61Q8NHU2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 AP003680.1-201ENST00000598970 3660 ntBASIC16■□□□□ 0.15
CFAP61Q8NHU2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CFAP61Q8NHU2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16■□□□□ 0.15
CFAP61Q8NHU2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms