Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 AC127383.1-201ENST00000444697 1800 ntBASIC16.83■□□□□ 0.28
BEST2Q8NFU1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 VDAC1P7-201ENST00000462417 847 ntBASIC16.83■□□□□ 0.28
BEST2Q8NFU1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 INTS4P2-202ENST00000614726 2019 ntBASIC16.83■□□□□ 0.28
BEST2Q8NFU1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST2Q8NFU1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AL162726.2-201ENST00000438986 1017 ntBASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.82■□□□□ 0.28
BEST2Q8NFU1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AL359711.2-201ENST00000563105 872 ntBASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AC132938.2-201ENST00000579188 680 ntBASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 AL591163.1-201ENST00000641757 987 ntBASIC16.82■□□□□ 0.28
BEST2Q8NFU1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST2Q8NFU1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 KRT8P22-201ENST00000562317 1415 ntBASIC16.81■□□□□ 0.28
BEST2Q8NFU1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 SOCS2P1-201ENST00000417727 557 ntBASIC16.81■□□□□ 0.28
BEST2Q8NFU1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 RN7SL837P-201ENST00000463010 287 ntBASIC16.81■□□□□ 0.28
BEST2Q8NFU1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 AC120045.2-201ENST00000567334 178 ntBASIC16.81■□□□□ 0.28
BEST2Q8NFU1 AC106886.1-201ENST00000568660 600 ntBASIC16.81■□□□□ 0.28
BEST2Q8NFU1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms