Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 KRT8P14-201ENST00000414254 1442 ntBASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.13■□□□□ 0.33
PCSK9Q8NBP7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 AC012313.1-201ENST00000593393 3059 ntBASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 MIR769-201ENST00000390225 118 ntBASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 AL008707.1-201ENST00000422498 534 ntBASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 SERPINA13P-202ENST00000478994 924 ntBASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCSK9Q8NBP7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 RN7SL713P-201ENST00000582127 302 ntBASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 PPY2P-201ENST00000582808 702 ntBASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 ZACNP1-201ENST00000612259 710 ntBASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 AC007787.1-201ENST00000588095 1583 ntBASIC17.11■□□□□ 0.33
PCSK9Q8NBP7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 CU633904.3-201ENST00000624042 1029 ntBASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 KRT8P19-201ENST00000551916 1455 ntBASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCSK9Q8NBP7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCSK9Q8NBP7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCSK9Q8NBP7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCSK9Q8NBP7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms