Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 FAM8A3P-201ENST00000427218 844 ntBASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 SPCS2P1-201ENST00000561636 679 ntBASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 MEP1AP4-201ENST00000423244 1087 ntBASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 AC004461.2-201ENST00000629517 803 ntBASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 LINC02199-201ENST00000506655 2702 ntBASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB42Q8N4Z0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 TNRC18P3-201ENST00000441896 2691 ntBASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 FAM207CP-201ENST00000443486 507 ntBASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 BCRP1-201ENST00000444246 691 ntBASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 TSPY16P-201ENST00000449843 468 ntBASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB42Q8N4Z0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms