Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 LDHBP1-201ENST00000455730 1119 ntBASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 AC022616.1-201ENST00000518688 554 ntBASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 AL008718.2-201ENST00000609206 1313 ntBASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 AC006449.5-201ENST00000610658 2098 ntBASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 AC011840.2-201ENST00000563063 1520 ntBASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 TNRC18P3-201ENST00000441896 2691 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 AC234782.1-201ENST00000451950 919 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 RN7SL181P-201ENST00000462921 277 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 MIR6727-201ENST00000620702 65 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 AC002472.3-201ENST00000640124 621 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 VDAC1P1-201ENST00000439229 848 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 AL161670.2-201ENST00000557650 1227 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 U62317.3-201ENST00000608319 855 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 AP003419.4-201ENST00000616071 517 ntBASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.4□□□□□ -0.1
COL27A1Q8IZC6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
COL27A1Q8IZC6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 PCDHA14-201ENST00000506751 2298 ntBASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 SHC1P1-201ENST00000425230 1745 ntBASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms