Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 RN7SL510P-201ENST00000581311 263 ntBASIC17.1■□□□□ 0.33
CNGA4Q8IV77 AC027307.2-201ENST00000591252 911 ntBASIC17.1■□□□□ 0.33
CNGA4Q8IV77 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 AC097359.3-201ENST00000603982 1210 ntBASIC17.1■□□□□ 0.33
CNGA4Q8IV77 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA4Q8IV77 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 AC026979.3-201ENST00000607315 403 ntBASIC17.09■□□□□ 0.33
CNGA4Q8IV77 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 AL359258.3-201ENST00000622910 2331 ntBASIC17.09■□□□□ 0.33
CNGA4Q8IV77 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNGA4Q8IV77 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNGA4Q8IV77 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CNGA4Q8IV77 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms