Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 AP006288.1-201ENST00000446065 395 ntBASIC14.05□□□□□ -0.16
LRRC28Q86X40 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.05□□□□□ -0.16
LRRC28Q86X40 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 PMS2P4-201ENST00000412466 1052 ntBASIC14.04□□□□□ -0.16
LRRC28Q86X40 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 AC254562.1-201ENST00000417586 456 ntBASIC14.04□□□□□ -0.16
LRRC28Q86X40 RPS8P6-201ENST00000426177 609 ntBASIC14.04□□□□□ -0.16
LRRC28Q86X40 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 FAM86C2P-203ENST00000528684 1004 ntBASIC14.04□□□□□ -0.16
LRRC28Q86X40 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 AP001160.2-201ENST00000596071 487 ntBASIC14.04□□□□□ -0.16
LRRC28Q86X40 AL161645.1-201ENST00000622716 1255 ntBASIC14.04□□□□□ -0.16
LRRC28Q86X40 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 AC007686.3-201ENST00000619017 3487 ntBASIC14.04□□□□□ -0.16
LRRC28Q86X40 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LRRC28Q86X40 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC28Q86X40 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms