Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 AC009779.1-201ENST00000551138 283 ntBASIC12.91□□□□□ -0.34
CSMD2Q7Z408 FO393412.1-201ENST00000619841 382 ntBASIC12.91□□□□□ -0.34
CSMD2Q7Z408 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 AC013726.1-201ENST00000563747 2285 ntBASIC12.91□□□□□ -0.34
CSMD2Q7Z408 ME2P1-201ENST00000426028 1970 ntBASIC12.91□□□□□ -0.34
CSMD2Q7Z408 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 AC015909.3-201ENST00000572855 1794 ntBASIC12.91□□□□□ -0.34
CSMD2Q7Z408 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 AC005324.6-201ENST00000587972 613 ntBASIC12.91□□□□□ -0.34
CSMD2Q7Z408 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CSMD2Q7Z408 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 KRT8P29-201ENST00000420409 1371 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC090164.2-201ENST00000611487 516 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 SNORD3B-2-202ENST00000571722 791 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC005618.3-201ENST00000624928 458 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 POM121L8P-201ENST00000417732 1281 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 POM121L9P-203ENST00000441984 1285 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 RPL7P35-201ENST00000446943 740 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 FTLP5-201ENST00000586853 534 ntBASIC12.9□□□□□ -0.34
CSMD2Q7Z408 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD2Q7Z408 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.9□□□□□ -0.35
CSMD2Q7Z408 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.89□□□□□ -0.35
CSMD2Q7Z408 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD2Q7Z408 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms