Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP54Q7Z3B4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP54Q7Z3B4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP54Q7Z3B4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NUP54Q7Z3B4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP54Q7Z3B4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.56□□□□□ -0.08
NUP54Q7Z3B4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP54Q7Z3B4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.56□□□□□ -0.08
NUP54Q7Z3B4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AC097376.2-205ENST00000610159 5334 ntBASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 FAM207CP-201ENST00000443486 507 ntBASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 UGT1A2P-201ENST00000454886 866 ntBASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 MIR4313-201ENST00000580760 101 ntBASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AC004461.2-201ENST00000629517 803 ntBASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 AC018892.3-201ENST00000623986 2499 ntBASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP54Q7Z3B4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 MIR4745-201ENST00000577608 62 ntBASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 AC004840.1-201ENST00000636359 365 ntBASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NUP54Q7Z3B4 AL607033.1-201ENST00000623900 1599 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms