Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 AL928921.2-201ENST00000641325 2442 ntBASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 AC063926.3-201ENST00000624734 5658 ntBASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 SPCS2P1-201ENST00000561636 679 ntBASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 AC025678.2-201ENST00000562061 970 ntBASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 AL139011.1-202ENST00000642063 584 ntBASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 AC099521.3-201ENST00000624251 2938 ntBASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 AC140479.7-201ENST00000636301 2332 ntBASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 AL031731.1-201ENST00000642131 2094 ntBASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXR1Q6PIV2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 AL035633.1-201ENST00000406139 838 ntBASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 TIMM8BP1-201ENST00000452384 211 ntBASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 AC105339.1-204ENST00000636249 355 ntBASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXR1Q6PIV2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.46■□□□□ 0.22
FOXR1Q6PIV2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
FOXR1Q6PIV2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXR1Q6PIV2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms