Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 AC087481.3-201ENST00000602886 1894 ntBASIC13.82□□□□□ -0.2
C11orf88Q6PI97 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C11orf88Q6PI97 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 LINC01101-201ENST00000622953 1884 ntBASIC13.81□□□□□ -0.2
C11orf88Q6PI97 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.81□□□□□ -0.2
C11orf88Q6PI97 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.81□□□□□ -0.2
C11orf88Q6PI97 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.81□□□□□ -0.2
C11orf88Q6PI97 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms