Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.87□□□□□ -0.03
LPCAT4Q643R3 AC027612.1-201ENST00000445234 2395 ntBASIC14.87□□□□□ -0.03
LPCAT4Q643R3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 POM121L3P-201ENST00000419331 1163 ntBASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AC063952.2-201ENST00000498792 1227 ntBASIC14.86□□□□□ -0.03
LPCAT4Q643R3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AL365330.1-201ENST00000607459 531 ntBASIC14.86□□□□□ -0.03
LPCAT4Q643R3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AL022326.1-202ENST00000641533 845 ntBASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AC005562.1-201ENST00000583030 3219 ntBASIC14.86□□□□□ -0.03
LPCAT4Q643R3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LPCAT4Q643R3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 AC211429.1-201ENST00000415277 523 ntBASIC14.85□□□□□ -0.03
LPCAT4Q643R3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 KRT17P6-201ENST00000453795 1220 ntBASIC14.85□□□□□ -0.03
LPCAT4Q643R3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 AL589182.2-201ENST00000619332 1049 ntBASIC14.85□□□□□ -0.03
LPCAT4Q643R3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.85□□□□□ -0.03
LPCAT4Q643R3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 AL356585.2-201ENST00000625078 2396 ntBASIC14.84□□□□□ -0.03
LPCAT4Q643R3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LPCAT4Q643R3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms