Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.62■□□□□ 0.57
PDS5AQ29RF7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 AL158070.2-201ENST00000623713 1621 ntBASIC18.61■□□□□ 0.57
PDS5AQ29RF7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.61■□□□□ 0.57
PDS5AQ29RF7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 AC026954.1-201ENST00000429771 1293 ntBASIC18.61■□□□□ 0.57
PDS5AQ29RF7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDS5AQ29RF7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
PDS5AQ29RF7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 AC092127.1-201ENST00000567093 3455 ntBASIC18.59■□□□□ 0.57
PDS5AQ29RF7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 FAM21FP-201ENST00000426241 1131 ntBASIC18.59■□□□□ 0.57
PDS5AQ29RF7 GHSR-202ENST00000427970 912 ntBASIC18.59■□□□□ 0.57
PDS5AQ29RF7 FAM197Y7-201ENST00000432892 766 ntBASIC18.59■□□□□ 0.57
PDS5AQ29RF7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 AL355994.2-201ENST00000447882 704 ntBASIC18.59■□□□□ 0.57
PDS5AQ29RF7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms