Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 AC046158.3-201ENST00000624947 2558 ntBASIC21.15■□□□□ 0.98
CGNL1Q0VF96 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 MSTO2P-201ENST00000314835 1709 ntBASIC21.15■□□□□ 0.98
CGNL1Q0VF96 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 AC005229.1-201ENST00000392885 409 ntBASIC21.15■□□□□ 0.98
CGNL1Q0VF96 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 AC012441.1-201ENST00000446669 685 ntBASIC21.15■□□□□ 0.98
CGNL1Q0VF96 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 AL138799.1-201ENST00000448213 1675 ntBASIC21.15■□□□□ 0.98
CGNL1Q0VF96 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CGNL1Q0VF96 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CGNL1Q0VF96 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.14■□□□□ 0.98
CGNL1Q0VF96 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CGNL1Q0VF96 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.14■□□□□ 0.98
CGNL1Q0VF96 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CGNL1Q0VF96 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CGNL1Q0VF96 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CGNL1Q0VF96 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 AC093433.1-201ENST00000458048 571 ntBASIC21.14■□□□□ 0.97
CGNL1Q0VF96 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 AC022137.2-201ENST00000503482 481 ntBASIC21.14■□□□□ 0.97
CGNL1Q0VF96 AC104989.1-201ENST00000519711 778 ntBASIC21.14■□□□□ 0.97
CGNL1Q0VF96 AP001889.1-201ENST00000525414 633 ntBASIC21.14■□□□□ 0.97
CGNL1Q0VF96 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CGNL1Q0VF96 AC009090.5-201ENST00000624886 2285 ntBASIC21.13■□□□□ 0.97
CGNL1Q0VF96 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 ACKR1-201ENST00000368121 1240 ntBASIC21.13■□□□□ 0.97
CGNL1Q0VF96 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 BAATP1-201ENST00000412284 1225 ntBASIC21.13■□□□□ 0.97
CGNL1Q0VF96 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 CROCCP4-201ENST00000457096 498 ntBASIC21.13■□□□□ 0.97
CGNL1Q0VF96 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CGNL1Q0VF96 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms