Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.76■□□□□ 0.27
CDR2Q01850 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 AC074338.1-201ENST00000416825 156 ntBASIC16.76■□□□□ 0.27
CDR2Q01850 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.76■□□□□ 0.27
CDR2Q01850 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 SERBP1P3-201ENST00000459980 809 ntBASIC16.76■□□□□ 0.27
CDR2Q01850 HLA-V-204ENST00000476601 1289 ntBASIC16.76■□□□□ 0.27
CDR2Q01850 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.76■□□□□ 0.27
CDR2Q01850 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 AL691403.2-201ENST00000618460 490 ntBASIC16.76■□□□□ 0.27
CDR2Q01850 AC023511.2-201ENST00000618803 211 ntBASIC16.76■□□□□ 0.27
CDR2Q01850 AL033527.5-202ENST00000641632 1098 ntBASIC16.76■□□□□ 0.27
CDR2Q01850 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.76■□□□□ 0.27
CDR2Q01850 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.76■□□□□ 0.27
CDR2Q01850 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 AC126365.1-201ENST00000578585 1514 ntBASIC16.75■□□□□ 0.27
CDR2Q01850 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.75■□□□□ 0.27
CDR2Q01850 NORAD-201ENST00000565493 5339 ntBASIC16.75■□□□□ 0.27
CDR2Q01850 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.75■□□□□ 0.27
CDR2Q01850 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDR2Q01850 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 Z97205.2-201ENST00000564697 1639 ntBASIC16.75■□□□□ 0.27
CDR2Q01850 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDR2Q01850 CNN2P2-201ENST00000443536 909 ntBASIC16.75■□□□□ 0.27
CDR2Q01850 CNN2P3-201ENST00000450201 906 ntBASIC16.75■□□□□ 0.27
CDR2Q01850 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.75■□□□□ 0.27
CDR2Q01850 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.75■□□□□ 0.27
CDR2Q01850 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.75■□□□□ 0.27
CDR2Q01850 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDR2Q01850 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CDR2Q01850 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.75■□□□□ 0.27
CDR2Q01850 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 SPDYE12P-201ENST00000618416 771 ntBASIC16.75■□□□□ 0.27
CDR2Q01850 AL136317.3-201ENST00000618497 906 ntBASIC16.75■□□□□ 0.27
CDR2Q01850 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.75■□□□□ 0.27
CDR2Q01850 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDR2Q01850 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDR2Q01850 FO538757.1-201ENST00000623083 1397 ntBASIC16.75■□□□□ 0.27
CDR2Q01850 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDR2Q01850 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.75■□□□□ 0.27
CDR2Q01850 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDR2Q01850 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CDR2Q01850 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.74■□□□□ 0.27
CDR2Q01850 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 TUBB3P1-201ENST00000405796 1332 ntBASIC16.74■□□□□ 0.27
CDR2Q01850 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDR2Q01850 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.74■□□□□ 0.27
CDR2Q01850 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.74■□□□□ 0.27
CDR2Q01850 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CDR2Q01850 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.74■□□□□ 0.27
CDR2Q01850 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.74■□□□□ 0.27
CDR2Q01850 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.74■□□□□ 0.27
CDR2Q01850 AC025048.3-201ENST00000590609 569 ntBASIC16.74■□□□□ 0.27
CDR2Q01850 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.74■□□□□ 0.27
CDR2Q01850 AC005702.4-201ENST00000618393 416 ntBASIC16.74■□□□□ 0.27
CDR2Q01850 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.74■□□□□ 0.27
CDR2Q01850 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.74■□□□□ 0.27
CDR2Q01850 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDR2Q01850 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.74■□□□□ 0.27
CDR2Q01850 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.74■□□□□ 0.27
CDR2Q01850 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
CDR2Q01850 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms