Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.89□□□□□ -0.03
GABREP78334 AC093813.1-201ENST00000605066 256 ntBASIC14.89□□□□□ -0.03
GABREP78334 AC244452.3-201ENST00000636814 210 ntBASIC14.89□□□□□ -0.03
GABREP78334 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.89□□□□□ -0.03
GABREP78334 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.89□□□□□ -0.03
GABREP78334 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.89□□□□□ -0.03
GABREP78334 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.89□□□□□ -0.03
GABREP78334 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.89□□□□□ -0.03
GABREP78334 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.89□□□□□ -0.03
GABREP78334 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.89□□□□□ -0.03
GABREP78334 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABREP78334 AP001282.1-201ENST00000531301 1499 ntBASIC14.89□□□□□ -0.03
GABREP78334 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
GABREP78334 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.88□□□□□ -0.03
GABREP78334 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.88□□□□□ -0.03
GABREP78334 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.88□□□□□ -0.03
GABREP78334 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 REXO1L1P-202ENST00000608646 1974 ntBASIC14.88□□□□□ -0.03
GABREP78334 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.88□□□□□ -0.03
GABREP78334 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
GABREP78334 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.88□□□□□ -0.03
GABREP78334 AC026410.3-201ENST00000514280 936 ntBASIC14.88□□□□□ -0.03
GABREP78334 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
GABREP78334 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
GABREP78334 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.88□□□□□ -0.03
GABREP78334 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.88□□□□□ -0.03
GABREP78334 MIR4741-201ENST00000579822 90 ntBASIC14.88□□□□□ -0.03
GABREP78334 RN7SL190P-201ENST00000582519 257 ntBASIC14.88□□□□□ -0.03
GABREP78334 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.88□□□□□ -0.03
GABREP78334 AC107373.2-201ENST00000607735 490 ntBASIC14.88□□□□□ -0.03
GABREP78334 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.88□□□□□ -0.03
GABREP78334 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.88□□□□□ -0.03
GABREP78334 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GABREP78334 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.88□□□□□ -0.03
GABREP78334 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.88□□□□□ -0.03
GABREP78334 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.88□□□□□ -0.03
GABREP78334 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GABREP78334 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.87□□□□□ -0.03
GABREP78334 AC134407.2-201ENST00000625089 1978 ntBASIC14.87□□□□□ -0.03
GABREP78334 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.87□□□□□ -0.03
GABREP78334 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
GABREP78334 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
GABREP78334 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.87□□□□□ -0.03
GABREP78334 PCDHB19P-201ENST00000570871 2371 ntBASIC14.87□□□□□ -0.03
GABREP78334 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
GABREP78334 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.87□□□□□ -0.03
GABREP78334 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 KRT18P25-201ENST00000508931 1278 ntBASIC14.87□□□□□ -0.03
GABREP78334 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.87□□□□□ -0.03
GABREP78334 AC078819.1-201ENST00000547454 765 ntBASIC14.87□□□□□ -0.03
GABREP78334 AC012085.1-201ENST00000548270 765 ntBASIC14.87□□□□□ -0.03
GABREP78334 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.87□□□□□ -0.03
GABREP78334 AC106872.11-201ENST00000605838 421 ntBASIC14.87□□□□□ -0.03
GABREP78334 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.87□□□□□ -0.03
GABREP78334 AL008638.5-201ENST00000623814 1298 ntBASIC14.87□□□□□ -0.03
GABREP78334 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
GABREP78334 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.87□□□□□ -0.03
GABREP78334 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.87□□□□□ -0.03
GABREP78334 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.87□□□□□ -0.03
GABREP78334 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GABREP78334 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms