Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 PHKG1P2-201ENST00000457537 863 ntBASIC12.96□□□□□ -0.33
SUPT4H1P63272 RNPS1P1-201ENST00000507437 918 ntBASIC12.96□□□□□ -0.33
SUPT4H1P63272 AC073648.2-201ENST00000510116 352 ntBASIC12.96□□□□□ -0.33
SUPT4H1P63272 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 MIR4751-201ENST00000578027 74 ntBASIC12.96□□□□□ -0.33
SUPT4H1P63272 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 AC097359.3-201ENST00000603982 1210 ntBASIC12.96□□□□□ -0.33
SUPT4H1P63272 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.96□□□□□ -0.33
SUPT4H1P63272 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SUPT4H1P63272 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.96□□□□□ -0.34
SUPT4H1P63272 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SUPT4H1P63272 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SUPT4H1P63272 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.96□□□□□ -0.34
SUPT4H1P63272 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.96□□□□□ -0.34
SUPT4H1P63272 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.96□□□□□ -0.34
SUPT4H1P63272 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SUPT4H1P63272 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.95□□□□□ -0.34
SUPT4H1P63272 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 RPL5P21-201ENST00000404620 815 ntBASIC12.95□□□□□ -0.34
SUPT4H1P63272 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 AC140658.5-201ENST00000438532 169 ntBASIC12.95□□□□□ -0.34
SUPT4H1P63272 HNRNPDP1-201ENST00000439535 754 ntBASIC12.95□□□□□ -0.34
SUPT4H1P63272 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 MIR3652-201ENST00000579335 131 ntBASIC12.95□□□□□ -0.34
SUPT4H1P63272 AC024267.1-201ENST00000582320 895 ntBASIC12.95□□□□□ -0.34
SUPT4H1P63272 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 AL445228.2-201ENST00000605589 952 ntBASIC12.95□□□□□ -0.34
SUPT4H1P63272 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 AC117500.6-201ENST00000624871 588 ntBASIC12.95□□□□□ -0.34
SUPT4H1P63272 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SUPT4H1P63272 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.95□□□□□ -0.34
SUPT4H1P63272 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms