Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 AP002761.4-201ENST00000565433 3361 ntBASIC11.81□□□□□ -0.52
HIST1H2BCP62807 AC023794.5-201ENST00000564380 2157 ntBASIC11.81□□□□□ -0.52
HIST1H2BCP62807 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 METTL15-202ENST00000403099 795 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 AC004911.1-201ENST00000416316 871 ntBASIC11.81□□□□□ -0.52
HIST1H2BCP62807 AL645939.2-201ENST00000427340 991 ntBASIC11.81□□□□□ -0.52
HIST1H2BCP62807 NUS1P1-201ENST00000446295 882 ntBASIC11.81□□□□□ -0.52
HIST1H2BCP62807 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 LY6E-205ENST00000519611 635 ntTSL 3 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.81□□□□□ -0.52
HIST1H2BCP62807 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.8□□□□□ -0.52
HIST1H2BCP62807 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 TERC-201ENST00000602385 541 ntBASIC11.8□□□□□ -0.52
HIST1H2BCP62807 AC073195.1-201ENST00000607241 877 ntBASIC11.8□□□□□ -0.52
HIST1H2BCP62807 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HIST1H2BCP62807 BX324167.2-201ENST00000623717 3316 ntBASIC11.8□□□□□ -0.52
HIST1H2BCP62807 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H2BCP62807 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H2BCP62807 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HIST1H2BCP62807 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H2BCP62807 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.79□□□□□ -0.52
HIST1H2BCP62807 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms