Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.88□□□□□ -0.35
SPCS3P61009 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
SPCS3P61009 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.88□□□□□ -0.35
SPCS3P61009 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SPCS3P61009 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SPCS3P61009 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.88□□□□□ -0.35
SPCS3P61009 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.88□□□□□ -0.35
SPCS3P61009 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SPCS3P61009 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 AC092127.1-201ENST00000567093 3455 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SPCS3P61009 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.87□□□□□ -0.35
SPCS3P61009 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.87□□□□□ -0.35
SPCS3P61009 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.87□□□□□ -0.35
SPCS3P61009 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.87□□□□□ -0.35
SPCS3P61009 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SPCS3P61009 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SPCS3P61009 IGLL3P-201ENST00000412472 434 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.87□□□□□ -0.35
SPCS3P61009 RHOQP3-201ENST00000437982 621 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 AC140658.5-201ENST00000438532 169 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 PRYP6-201ENST00000514804 343 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 UNC93B6-202ENST00000528242 690 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 AC243562.2-201ENST00000561247 970 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 AC023141.13-201ENST00000604991 943 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 AC007292.2-201ENST00000593524 1812 ntBASIC12.87□□□□□ -0.35
SPCS3P61009 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.87□□□□□ -0.35
SPCS3P61009 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.87□□□□□ -0.35
SPCS3P61009 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.87□□□□□ -0.35
SPCS3P61009 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.87□□□□□ -0.35
SPCS3P61009 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SPCS3P61009 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SPCS3P61009 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SPCS3P61009 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.86□□□□□ -0.35
SPCS3P61009 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SPCS3P61009 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.86□□□□□ -0.35
SPCS3P61009 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SPCS3P61009 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.86□□□□□ -0.35
SPCS3P61009 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.86□□□□□ -0.35
SPCS3P61009 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.86□□□□□ -0.35
SPCS3P61009 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SPCS3P61009 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.86□□□□□ -0.35
SPCS3P61009 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 COL6A4P2-202ENST00000504443 2753 ntBASIC12.86□□□□□ -0.35
SPCS3P61009 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.86□□□□□ -0.35
SPCS3P61009 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SPCS3P61009 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SPCS3P61009 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.86□□□□□ -0.35
SPCS3P61009 HCG4B-203ENST00000450128 991 ntBASIC12.86□□□□□ -0.35
SPCS3P61009 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.86□□□□□ -0.35
SPCS3P61009 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SPCS3P61009 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.86□□□□□ -0.35
SPCS3P61009 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms