Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.52□□□□□ -0.25
KLF3P57682 DFFBP1-201ENST00000433250 979 ntBASIC13.52□□□□□ -0.25
KLF3P57682 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 MEIS3P1-201ENST00000495167 958 ntBASIC13.52□□□□□ -0.25
KLF3P57682 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KLF3P57682 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.52□□□□□ -0.25
KLF3P57682 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.52□□□□□ -0.25
KLF3P57682 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KLF3P57682 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 AC007541.1-201ENST00000570282 1469 ntBASIC13.52□□□□□ -0.25
KLF3P57682 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.52□□□□□ -0.25
KLF3P57682 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
KLF3P57682 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.52□□□□□ -0.25
KLF3P57682 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.52□□□□□ -0.25
KLF3P57682 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.52□□□□□ -0.25
KLF3P57682 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
KLF3P57682 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.52□□□□□ -0.25
KLF3P57682 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
KLF3P57682 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
KLF3P57682 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KLF3P57682 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KLF3P57682 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
KLF3P57682 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KLF3P57682 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 LINC02199-201ENST00000506655 2702 ntBASIC13.51□□□□□ -0.25
KLF3P57682 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.51□□□□□ -0.25
KLF3P57682 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
KLF3P57682 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 AL391825.1-201ENST00000457671 1364 ntBASIC13.51□□□□□ -0.25
KLF3P57682 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.51□□□□□ -0.25
KLF3P57682 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 AC087499.6-201ENST00000411576 835 ntBASIC13.51□□□□□ -0.25
KLF3P57682 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.51□□□□□ -0.25
KLF3P57682 AC074338.1-201ENST00000416825 156 ntBASIC13.51□□□□□ -0.25
KLF3P57682 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.51□□□□□ -0.25
KLF3P57682 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.51□□□□□ -0.25
KLF3P57682 GNAQP1-201ENST00000444815 1067 ntBASIC13.51□□□□□ -0.25
KLF3P57682 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.51□□□□□ -0.25
KLF3P57682 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.51□□□□□ -0.25
KLF3P57682 AC055876.2-201ENST00000531834 546 ntBASIC13.51□□□□□ -0.25
KLF3P57682 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.51□□□□□ -0.25
KLF3P57682 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
KLF3P57682 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KLF3P57682 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms