Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH13P55290 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDH13P55290 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH13P55290 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 AL607033.1-201ENST00000623900 1599 ntBASIC15.41■□□□□ 0.06
CDH13P55290 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH13P55290 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH13P55290 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH13P55290 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH13P55290 CEND1P1-201ENST00000451006 455 ntBASIC15.4■□□□□ 0.06
CDH13P55290 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH13P55290 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH13P55290 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
CDH13P55290 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 AC105339.1-204ENST00000636249 355 ntBASIC15.4■□□□□ 0.06
CDH13P55290 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 ELL2P1-201ENST00000413990 1906 ntBASIC15.4■□□□□ 0.06
CDH13P55290 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDH13P55290 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH13P55290 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH13P55290 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 AC023024.2-201ENST00000623561 1993 ntBASIC15.4■□□□□ 0.06
CDH13P55290 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH13P55290 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH13P55290 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH13P55290 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH13P55290 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CDH13P55290 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
CDH13P55290 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CDH13P55290 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CDH13P55290 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 AC126365.1-201ENST00000578585 1514 ntBASIC15.39■□□□□ 0.05
CDH13P55290 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CDH13P55290 AC005237.2-201ENST00000434368 219 ntBASIC15.39■□□□□ 0.05
CDH13P55290 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDH13P55290 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH13P55290 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH13P55290 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH13P55290 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH13P55290 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 AC022145.2-201ENST00000598203 171 ntBASIC15.39■□□□□ 0.05
CDH13P55290 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.39■□□□□ 0.05
CDH13P55290 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH13P55290 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDH13P55290 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH13P55290 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH13P55290 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH13P55290 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms