Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
HMGA2P52926 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 AP000845.1-201ENST00000581677 2131 ntBASIC14.32□□□□□ -0.12
HMGA2P52926 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.32□□□□□ -0.12
HMGA2P52926 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGA2P52926 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGA2P52926 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
HMGA2P52926 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 SPDYE17-201ENST00000412399 783 ntBASIC14.31□□□□□ -0.12
HMGA2P52926 HIST3H2BA-201ENST00000436555 524 ntBASIC14.31□□□□□ -0.12
HMGA2P52926 AL591424.1-201ENST00000442569 1213 ntBASIC14.31□□□□□ -0.12
HMGA2P52926 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.31□□□□□ -0.12
HMGA2P52926 AC079140.1-201ENST00000508039 487 ntBASIC14.31□□□□□ -0.12
HMGA2P52926 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
HMGA2P52926 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGA2P52926 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HMGA2P52926 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGA2P52926 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGA2P52926 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HMGA2P52926 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGA2P52926 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HMGA2P52926 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HMGA2P52926 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HMGA2P52926 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGA2P52926 SPDYE11-202ENST00000450699 704 ntBASIC14.3□□□□□ -0.12
HMGA2P52926 AC009078.2-202ENST00000463353 338 ntBASIC14.3□□□□□ -0.12
HMGA2P52926 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGA2P52926 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 KRT8P48-201ENST00000515599 1220 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms