Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
TUBP50607 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TUBP50607 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TUBP50607 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TUBP50607 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.58■□□□□ 0.24
TUBP50607 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.58■□□□□ 0.24
TUBP50607 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.57■□□□□ 0.24
TUBP50607 LINC02447-202ENST00000501888 2146 ntBASIC16.57■□□□□ 0.24
TUBP50607 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TUBP50607 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TUBP50607 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBP50607 CU639417.3-201ENST00000624240 1404 ntBASIC16.57■□□□□ 0.24
TUBP50607 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TUBP50607 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.57■□□□□ 0.24
TUBP50607 AC098614.1-201ENST00000368528 745 ntBASIC16.57■□□□□ 0.24
TUBP50607 AC005034.1-201ENST00000426657 489 ntBASIC16.57■□□□□ 0.24
TUBP50607 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TUBP50607 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBP50607 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.57■□□□□ 0.24
TUBP50607 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBP50607 RARRES2P5-201ENST00000564013 466 ntBASIC16.57■□□□□ 0.24
TUBP50607 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TUBP50607 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TUBP50607 AL035252.4-201ENST00000624174 288 ntBASIC16.57■□□□□ 0.24
TUBP50607 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TUBP50607 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TUBP50607 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBP50607 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.57■□□□□ 0.24
TUBP50607 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBP50607 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TUBP50607 AC010491.1-201ENST00000563101 2797 ntBASIC16.56■□□□□ 0.24
TUBP50607 TNRC18P2-201ENST00000417666 2714 ntBASIC16.56■□□□□ 0.24
TUBP50607 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 AC074338.1-201ENST00000416825 156 ntBASIC16.56■□□□□ 0.24
TUBP50607 COX5BP8-201ENST00000416911 349 ntBASIC16.56■□□□□ 0.24
TUBP50607 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 NME2P1-201ENST00000426182 414 ntBASIC16.56■□□□□ 0.24
TUBP50607 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.56■□□□□ 0.24
TUBP50607 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.56■□□□□ 0.24
TUBP50607 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBP50607 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TUBP50607 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.56■□□□□ 0.24
TUBP50607 LINC01115-203ENST00000606068 577 ntBASIC16.56■□□□□ 0.24
TUBP50607 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TUBP50607 CICP13-201ENST00000422015 2789 ntBASIC16.56■□□□□ 0.24
TUBP50607 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.56■□□□□ 0.24
TUBP50607 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBP50607 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.56■□□□□ 0.24
TUBP50607 AC104581.4-201ENST00000623126 3052 ntBASIC16.56■□□□□ 0.24
TUBP50607 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBP50607 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBP50607 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBP50607 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.55■□□□□ 0.24
TUBP50607 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBP50607 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.55■□□□□ 0.24
TUBP50607 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBP50607 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBP50607 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.55■□□□□ 0.24
TUBP50607 HNRNPUP1-201ENST00000554987 333 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms