Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.86□□□□□ -0.03
CLK1P49759 RN7SL589P-201ENST00000481268 310 ntBASIC14.86□□□□□ -0.03
CLK1P49759 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.86□□□□□ -0.03
CLK1P49759 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.86□□□□□ -0.03
CLK1P49759 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.86□□□□□ -0.03
CLK1P49759 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.86□□□□□ -0.03
CLK1P49759 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.86□□□□□ -0.03
CLK1P49759 AC099522.2-201ENST00000607001 744 ntBASIC14.86□□□□□ -0.03
CLK1P49759 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.86□□□□□ -0.03
CLK1P49759 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.86□□□□□ -0.03
CLK1P49759 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.86□□□□□ -0.03
CLK1P49759 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLK1P49759 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLK1P49759 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLK1P49759 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLK1P49759 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLK1P49759 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLK1P49759 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.85□□□□□ -0.03
CLK1P49759 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.85□□□□□ -0.03
CLK1P49759 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CLK1P49759 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.85□□□□□ -0.03
CLK1P49759 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLK1P49759 AL355306.1-201ENST00000415580 579 ntBASIC14.85□□□□□ -0.03
CLK1P49759 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 AC005829.1-201ENST00000570002 483 ntBASIC14.85□□□□□ -0.03
CLK1P49759 MIR3687-2-201ENST00000577708 61 ntBASIC14.85□□□□□ -0.03
CLK1P49759 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 MIR3687-1-201ENST00000614492 61 ntBASIC14.85□□□□□ -0.03
CLK1P49759 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.85□□□□□ -0.03
CLK1P49759 AC092902.6-201ENST00000641783 218 ntBASIC14.85□□□□□ -0.03
CLK1P49759 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLK1P49759 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLK1P49759 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
CLK1P49759 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 PTENP1-202ENST00000532280 3996 ntBASIC14.84□□□□□ -0.03
CLK1P49759 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.84□□□□□ -0.03
CLK1P49759 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 U82695.1-201ENST00000635752 1889 ntBASIC14.84□□□□□ -0.03
CLK1P49759 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms