Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.19■□□□□ 0.34
HTTP42858 AC005632.3-201ENST00000605544 308 ntBASIC17.19■□□□□ 0.34
HTTP42858 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.19■□□□□ 0.34
HTTP42858 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HTTP42858 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.18■□□□□ 0.34
HTTP42858 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
HTTP42858 E2F3P2-201ENST00000447755 1422 ntBASIC17.18■□□□□ 0.34
HTTP42858 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
HTTP42858 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
HTTP42858 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.18■□□□□ 0.34
HTTP42858 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.18■□□□□ 0.34
HTTP42858 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.18■□□□□ 0.34
HTTP42858 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.18■□□□□ 0.34
HTTP42858 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
HTTP42858 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 AC020910.5-201ENST00000623668 1865 ntBASIC17.18■□□□□ 0.34
HTTP42858 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 MIR3677-201ENST00000578964 60 ntBASIC17.18■□□□□ 0.34
HTTP42858 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 AC011477.6-201ENST00000604980 1927 ntBASIC17.18■□□□□ 0.34
HTTP42858 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTTP42858 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.17■□□□□ 0.34
HTTP42858 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HTTP42858 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.17■□□□□ 0.34
HTTP42858 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.17■□□□□ 0.34
HTTP42858 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.17■□□□□ 0.34
HTTP42858 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.17■□□□□ 0.34
HTTP42858 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.17■□□□□ 0.34
HTTP42858 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HTTP42858 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.17■□□□□ 0.34
HTTP42858 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.17■□□□□ 0.34
HTTP42858 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.17■□□□□ 0.34
HTTP42858 DDX39AP1-201ENST00000445147 1181 ntBASIC17.17■□□□□ 0.34
HTTP42858 RPL7P35-201ENST00000446943 740 ntBASIC17.17■□□□□ 0.34
HTTP42858 AC027237.1-201ENST00000560942 655 ntBASIC17.17■□□□□ 0.34
HTTP42858 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.17■□□□□ 0.34
HTTP42858 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.17■□□□□ 0.34
HTTP42858 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.17■□□□□ 0.34
HTTP42858 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.17■□□□□ 0.34
HTTP42858 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HTTP42858 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.17■□□□□ 0.34
HTTP42858 AC015909.3-201ENST00000572855 1794 ntBASIC17.17■□□□□ 0.34
HTTP42858 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HTTP42858 AC011840.2-201ENST00000563063 1520 ntBASIC17.16■□□□□ 0.34
HTTP42858 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HTTP42858 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 MIR557-201ENST00000385239 98 ntBASIC17.16■□□□□ 0.34
HTTP42858 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.16■□□□□ 0.34
HTTP42858 HLA-J-204ENST00000495278 958 ntBASIC17.16■□□□□ 0.34
HTTP42858 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.16■□□□□ 0.34
HTTP42858 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HTTP42858 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 MBLAC2-202ENST00000514906 1936 ntBASIC17.16■□□□□ 0.34
HTTP42858 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.16■□□□□ 0.34
HTTP42858 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HTTP42858 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 AP000593.2-201ENST00000542775 1433 ntBASIC17.16■□□□□ 0.34
HTTP42858 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.16■□□□□ 0.34
HTTP42858 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.16■□□□□ 0.34
HTTP42858 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HTTP42858 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HTTP42858 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HTTP42858 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.16■□□□□ 0.34
HTTP42858 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
HTTP42858 AC006449.6-201ENST00000612330 2296 ntBASIC17.16■□□□□ 0.34
HTTP42858 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTTP42858 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HTTP42858 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.16■□□□□ 0.34
HTTP42858 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.16■□□□□ 0.34
HTTP42858 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms