Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AF228730.8-201ENST00000642140 221 ntBASIC17.21■□□□□ 0.35
USP8P40818 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP8P40818 CICP4-201ENST00000447359 2812 ntBASIC17.21■□□□□ 0.35
USP8P40818 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP8P40818 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.21■□□□□ 0.35
USP8P40818 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP8P40818 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP8P40818 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP8P40818 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.21■□□□□ 0.34
USP8P40818 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.21■□□□□ 0.34
USP8P40818 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
USP8P40818 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
USP8P40818 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP8P40818 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.2■□□□□ 0.34
USP8P40818 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 MYO15B-237ENST00000642007 4893 ntBASIC17.2■□□□□ 0.34
USP8P40818 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP8P40818 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.2■□□□□ 0.34
USP8P40818 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.2■□□□□ 0.34
USP8P40818 AL139010.1-201ENST00000454878 894 ntBASIC17.2■□□□□ 0.34
USP8P40818 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.2■□□□□ 0.34
USP8P40818 AP000344.2-201ENST00000512987 629 ntBASIC17.2■□□□□ 0.34
USP8P40818 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.2■□□□□ 0.34
USP8P40818 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.2■□□□□ 0.34
USP8P40818 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.2■□□□□ 0.34
USP8P40818 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.2■□□□□ 0.34
USP8P40818 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.2■□□□□ 0.34
USP8P40818 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.2■□□□□ 0.34
USP8P40818 AC003101.2-201ENST00000612557 442 ntBASIC17.2■□□□□ 0.34
USP8P40818 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
USP8P40818 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.2■□□□□ 0.34
USP8P40818 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.2■□□□□ 0.34
USP8P40818 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP8P40818 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.2■□□□□ 0.34
USP8P40818 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.2■□□□□ 0.34
USP8P40818 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.2■□□□□ 0.34
USP8P40818 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP8P40818 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 DKFZP434A062-201ENST00000573103 5021 ntBASIC17.19■□□□□ 0.34
USP8P40818 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.19■□□□□ 0.34
USP8P40818 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.19■□□□□ 0.34
USP8P40818 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.19■□□□□ 0.34
USP8P40818 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.19■□□□□ 0.34
USP8P40818 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.19■□□□□ 0.34
USP8P40818 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.19■□□□□ 0.34
USP8P40818 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
USP8P40818 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.19■□□□□ 0.34
USP8P40818 AL596442.2-201ENST00000610240 980 ntBASIC17.19■□□□□ 0.34
USP8P40818 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.19■□□□□ 0.34
USP8P40818 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.19■□□□□ 0.34
USP8P40818 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
USP8P40818 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.19■□□□□ 0.34
USP8P40818 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP8P40818 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.18■□□□□ 0.34
USP8P40818 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 AC092127.1-201ENST00000567093 3455 ntBASIC17.18■□□□□ 0.34
USP8P40818 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP8P40818 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms