Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT9P35527 RNA5SP410-201ENST00000516285 106 ntBASIC17.24■□□□□ 0.35
KRT9P35527 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
KRT9P35527 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT9P35527 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
KRT9P35527 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT9P35527 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 AC105339.1-204ENST00000636249 355 ntBASIC17.24■□□□□ 0.35
KRT9P35527 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRT9P35527 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT9P35527 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT9P35527 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT9P35527 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRT9P35527 AC023908.3-201ENST00000564211 3047 ntBASIC17.23■□□□□ 0.35
KRT9P35527 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT9P35527 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT9P35527 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT9P35527 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT9P35527 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT9P35527 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT9P35527 RPSAP43-201ENST00000402237 625 ntBASIC17.23■□□□□ 0.35
KRT9P35527 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT9P35527 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
KRT9P35527 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT9P35527 UPF3AP3-201ENST00000420996 769 ntBASIC17.23■□□□□ 0.35
KRT9P35527 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT9P35527 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.23■□□□□ 0.35
KRT9P35527 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT9P35527 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 AL136982.4-201ENST00000437689 1740 ntBASIC17.23■□□□□ 0.35
KRT9P35527 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT9P35527 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT9P35527 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT9P35527 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT9P35527 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT9P35527 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KRT9P35527 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KRT9P35527 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT9P35527 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
KRT9P35527 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
KRT9P35527 FAM220BP-201ENST00000377689 816 ntBASIC17.22■□□□□ 0.35
KRT9P35527 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT9P35527 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
KRT9P35527 RPS8P6-201ENST00000426177 609 ntBASIC17.22■□□□□ 0.35
KRT9P35527 AC005237.2-201ENST00000434368 219 ntBASIC17.22■□□□□ 0.35
KRT9P35527 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT9P35527 AC069335.1-201ENST00000489972 472 ntBASIC17.22■□□□□ 0.35
KRT9P35527 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
KRT9P35527 AC092865.5-201ENST00000545435 363 ntBASIC17.22■□□□□ 0.35
KRT9P35527 AC022145.2-201ENST00000598203 171 ntBASIC17.22■□□□□ 0.35
KRT9P35527 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.22■□□□□ 0.35
KRT9P35527 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT9P35527 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT9P35527 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 LINC00528-201ENST00000600723 2160 ntBASIC17.22■□□□□ 0.35
KRT9P35527 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
KRT9P35527 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
KRT9P35527 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
KRT9P35527 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT9P35527 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT9P35527 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT9P35527 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT9P35527 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT9P35527 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT9P35527 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms