Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXD13P35453 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXD13P35453 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 HMGN1P19-201ENST00000436976 333 ntBASIC17.05■□□□□ 0.32
HOXD13P35453 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXD13P35453 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXD13P35453 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXD13P35453 TPRX2P-201ENST00000535362 881 ntBASIC17.05■□□□□ 0.32
HOXD13P35453 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
HOXD13P35453 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXD13P35453 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HOXD13P35453 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXD13P35453 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXD13P35453 TCAF2P1-201ENST00000291129 2421 ntBASIC17.05■□□□□ 0.32
HOXD13P35453 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXD13P35453 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD13P35453 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXD13P35453 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXD13P35453 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXD13P35453 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXD13P35453 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXD13P35453 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 MROH4P-201ENST00000431302 1578 ntBASIC17.04■□□□□ 0.32
HOXD13P35453 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXD13P35453 AC104457.1-201ENST00000401024 814 ntBASIC17.04■□□□□ 0.32
HOXD13P35453 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXD13P35453 RN7SL399P-201ENST00000471648 279 ntBASIC17.04■□□□□ 0.32
HOXD13P35453 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXD13P35453 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXD13P35453 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXD13P35453 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 AGAP7P-201ENST00000582299 2062 ntBASIC17.04■□□□□ 0.32
HOXD13P35453 AGAP14-201ENST00000624701 2060 ntBASIC17.04■□□□□ 0.32
HOXD13P35453 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXD13P35453 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXD13P35453 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD13P35453 LINC00528-201ENST00000600723 2160 ntBASIC17.04■□□□□ 0.32
HOXD13P35453 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 SLC7A15P-201ENST00000424028 1363 ntBASIC17.03■□□□□ 0.32
HOXD13P35453 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 AC103702.1-201ENST00000548801 2630 ntBASIC17.03■□□□□ 0.32
HOXD13P35453 PKD1P1-201ENST00000458669 6805 ntBASIC17.03■□□□□ 0.32
HOXD13P35453 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXD13P35453 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXD13P35453 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 AC098850.1-201ENST00000419919 790 ntBASIC17.03■□□□□ 0.32
HOXD13P35453 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXD13P35453 AC002472.2-201ENST00000442739 958 ntBASIC17.03■□□□□ 0.32
HOXD13P35453 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
HOXD13P35453 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXD13P35453 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 LINC02560-201ENST00000596379 459 ntBASIC17.03■□□□□ 0.32
HOXD13P35453 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXD13P35453 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HOXD13P35453 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
HOXD13P35453 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD13P35453 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms