Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC124067.4-201ENST00000519691 2379 ntBASIC21.65■■□□□ 1.06
CPS1P31327 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 RN7SKP214-201ENST00000364208 315 ntBASIC21.65■■□□□ 1.06
CPS1P31327 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC21.65■■□□□ 1.06
CPS1P31327 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CPS1P31327 ALG1L13P-202ENST00000519320 584 ntBASIC21.65■■□□□ 1.06
CPS1P31327 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC21.65■■□□□ 1.06
CPS1P31327 DGAT2L7P-201ENST00000602462 744 ntBASIC21.65■■□□□ 1.06
CPS1P31327 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CPS1P31327 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPS1P31327 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.64■■□□□ 1.06
CPS1P31327 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPS1P31327 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC21.64■■□□□ 1.05
CPS1P31327 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CPS1P31327 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC21.64■■□□□ 1.05
CPS1P31327 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC21.64■■□□□ 1.05
CPS1P31327 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.64■■□□□ 1.05
CPS1P31327 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC21.64■■□□□ 1.05
CPS1P31327 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 AL139094.1-201ENST00000405549 1188 ntBASIC21.64■■□□□ 1.05
CPS1P31327 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC21.64■■□□□ 1.05
CPS1P31327 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.64■■□□□ 1.05
CPS1P31327 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
CPS1P31327 STUB1-204ENST00000564370 875 ntTSL 2 BASIC21.64■■□□□ 1.05
CPS1P31327 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.64■■□□□ 1.05
CPS1P31327 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPS1P31327 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC21.63■■□□□ 1.05
CPS1P31327 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CPS1P31327 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CPS1P31327 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.63■■□□□ 1.05
CPS1P31327 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 RCC2P8-201ENST00000502779 1035 ntBASIC21.63■■□□□ 1.05
CPS1P31327 DNM1P51-201ENST00000558149 522 ntBASIC21.63■■□□□ 1.05
CPS1P31327 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC21.63■■□□□ 1.05
CPS1P31327 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.63■■□□□ 1.05
CPS1P31327 AC103810.10-201ENST00000606504 343 ntBASIC21.63■■□□□ 1.05
CPS1P31327 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC21.63■■□□□ 1.05
CPS1P31327 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPS1P31327 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CPS1P31327 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC21.62■■□□□ 1.05
CPS1P31327 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC21.62■■□□□ 1.05
CPS1P31327 HPGD-203ENST00000422112 805 ntTSL 2 BASIC21.62■■□□□ 1.05
CPS1P31327 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 AC012362.1-201ENST00000434906 739 ntBASIC21.62■■□□□ 1.05
CPS1P31327 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC21.62■■□□□ 1.05
CPS1P31327 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC21.62■■□□□ 1.05
CPS1P31327 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CPS1P31327 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 FOS-204ENST00000554617 796 ntTSL 2 BASIC21.62■■□□□ 1.05
CPS1P31327 RPL17P45-201ENST00000586289 509 ntBASIC21.62■■□□□ 1.05
CPS1P31327 AL132994.2-201ENST00000603120 687 ntBASIC21.62■■□□□ 1.05
CPS1P31327 AC138466.4-201ENST00000623965 852 ntBASIC21.62■■□□□ 1.05
CPS1P31327 NAP1L6-202ENST00000641404 1222 ntBASIC21.62■■□□□ 1.05
CPS1P31327 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.62■■□□□ 1.05
CPS1P31327 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC21.62■■□□□ 1.05
CPS1P31327 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CPS1P31327 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPS1P31327 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPS1P31327 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPS1P31327 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPS1P31327 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPS1P31327 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPS1P31327 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CPS1P31327 AC104073.2-201ENST00000453737 312 ntBASIC21.61■■□□□ 1.05
CPS1P31327 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC21.61■■□□□ 1.05
CPS1P31327 TPM1-223ENST00000560445 485 ntTSL 3 BASIC21.61■■□□□ 1.05
CPS1P31327 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms