Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.58□□□□□ -0.24
EPHA1P21709 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.58□□□□□ -0.24
EPHA1P21709 AP000842.3-202ENST00000569238 1080 ntBASIC13.58□□□□□ -0.24
EPHA1P21709 MIR3909-201ENST00000579518 119 ntBASIC13.58□□□□□ -0.24
EPHA1P21709 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.58□□□□□ -0.24
EPHA1P21709 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
EPHA1P21709 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 AL031731.1-201ENST00000642131 2094 ntBASIC13.58□□□□□ -0.24
EPHA1P21709 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
EPHA1P21709 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.58□□□□□ -0.24
EPHA1P21709 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
EPHA1P21709 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.58□□□□□ -0.24
EPHA1P21709 AC063926.2-201ENST00000623766 1308 ntBASIC13.58□□□□□ -0.24
EPHA1P21709 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.58□□□□□ -0.24
EPHA1P21709 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.58□□□□□ -0.24
EPHA1P21709 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.58□□□□□ -0.24
EPHA1P21709 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
EPHA1P21709 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
EPHA1P21709 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.58□□□□□ -0.24
EPHA1P21709 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.57□□□□□ -0.24
EPHA1P21709 KRT8P39-201ENST00000396270 1433 ntBASIC13.57□□□□□ -0.24
EPHA1P21709 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.57□□□□□ -0.24
EPHA1P21709 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.57□□□□□ -0.24
EPHA1P21709 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
EPHA1P21709 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
EPHA1P21709 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.57□□□□□ -0.24
EPHA1P21709 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.57□□□□□ -0.24
EPHA1P21709 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 AL512652.2-201ENST00000625156 1716 ntBASIC13.57□□□□□ -0.24
EPHA1P21709 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.57□□□□□ -0.24
EPHA1P21709 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.57□□□□□ -0.24
EPHA1P21709 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.57□□□□□ -0.24
EPHA1P21709 UGT1A2P-201ENST00000454886 866 ntBASIC13.57□□□□□ -0.24
EPHA1P21709 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 LINC02560-201ENST00000596379 459 ntBASIC13.57□□□□□ -0.24
EPHA1P21709 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.57□□□□□ -0.24
EPHA1P21709 AC008761.3-201ENST00000624803 892 ntBASIC13.57□□□□□ -0.24
EPHA1P21709 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.57□□□□□ -0.24
EPHA1P21709 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.57□□□□□ -0.24
EPHA1P21709 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.57□□□□□ -0.24
EPHA1P21709 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.57□□□□□ -0.24
EPHA1P21709 AC013268.4-201ENST00000637413 2228 ntBASIC13.57□□□□□ -0.24
EPHA1P21709 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.57□□□□□ -0.24
EPHA1P21709 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.57□□□□□ -0.24
EPHA1P21709 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.57□□□□□ -0.24
EPHA1P21709 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.57□□□□□ -0.24
EPHA1P21709 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
EPHA1P21709 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 AC016027.1-202ENST00000607927 1699 ntBASIC13.56□□□□□ -0.24
EPHA1P21709 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.56□□□□□ -0.24
EPHA1P21709 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.56□□□□□ -0.24
EPHA1P21709 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
EPHA1P21709 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.56□□□□□ -0.24
EPHA1P21709 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
EPHA1P21709 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.56□□□□□ -0.24
EPHA1P21709 HCG24-202ENST00000414398 717 ntTSL 3 BASIC13.56□□□□□ -0.24
EPHA1P21709 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.56□□□□□ -0.24
EPHA1P21709 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms